Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT9P35527 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT9P35527 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 PTCHD3P3-201ENST00000403073 906 ntBASIC18.12■□□□□ 0.49
KRT9P35527 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.12■□□□□ 0.49
KRT9P35527 AF186996.4-201ENST00000467186 377 ntBASIC18.12■□□□□ 0.49
KRT9P35527 KRT126P-201ENST00000549467 1181 ntBASIC18.12■□□□□ 0.49
KRT9P35527 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.12■□□□□ 0.49
KRT9P35527 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 TP73-AS1-207ENST00000624167 988 ntBASIC18.12■□□□□ 0.49
KRT9P35527 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT9P35527 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
KRT9P35527 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 PI4KAP1-204ENST00000612579 1703 ntBASIC18.12■□□□□ 0.49
KRT9P35527 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
KRT9P35527 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
KRT9P35527 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
KRT9P35527 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT9P35527 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
KRT9P35527 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 FAAHP1-202ENST00000446499 1238 ntBASIC18.11■□□□□ 0.49
KRT9P35527 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT9P35527 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT9P35527 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.11■□□□□ 0.49
KRT9P35527 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.11■□□□□ 0.49
KRT9P35527 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.11■□□□□ 0.49
KRT9P35527 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
KRT9P35527 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
KRT9P35527 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 RPS2P28-201ENST00000314255 741 ntBASIC18.1■□□□□ 0.49
KRT9P35527 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 ELK2BP-201ENST00000415014 1224 ntBASIC18.1■□□□□ 0.49
KRT9P35527 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT9P35527 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.1■□□□□ 0.49
KRT9P35527 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.1■□□□□ 0.49
KRT9P35527 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
KRT9P35527 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
KRT9P35527 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms