Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.69■□□□□ 0.1
RORAP35398 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.69■□□□□ 0.1
RORAP35398 AC107890.1-201ENST00000422478 521 ntBASIC15.69■□□□□ 0.1
RORAP35398 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC15.69■□□□□ 0.1
RORAP35398 AC125807.1-201ENST00000483097 614 ntBASIC15.69■□□□□ 0.1
RORAP35398 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.69■□□□□ 0.1
RORAP35398 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.69■□□□□ 0.1
RORAP35398 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.69■□□□□ 0.1
RORAP35398 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 AL671710.1-201ENST00000610245 2349 ntBASIC15.69■□□□□ 0.1
RORAP35398 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
RORAP35398 SNX33P1-201ENST00000592116 1762 ntBASIC15.69■□□□□ 0.1
RORAP35398 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RORAP35398 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.68■□□□□ 0.1
RORAP35398 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 AC005915.1-201ENST00000624912 2018 ntBASIC15.68■□□□□ 0.1
RORAP35398 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.68■□□□□ 0.1
RORAP35398 AC055876.3-201ENST00000431496 288 ntBASIC15.68■□□□□ 0.1
RORAP35398 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.68■□□□□ 0.1
RORAP35398 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 AC140878.1-201ENST00000565277 250 ntBASIC15.68■□□□□ 0.1
RORAP35398 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.68■□□□□ 0.1
RORAP35398 AC138649.4-201ENST00000612222 287 ntBASIC15.68■□□□□ 0.1
RORAP35398 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
RORAP35398 AC080080.1-201ENST00000625121 2420 ntBASIC15.68■□□□□ 0.1
RORAP35398 AC105020.1-201ENST00000435356 2205 ntBASIC15.68■□□□□ 0.1
RORAP35398 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.68■□□□□ 0.1
RORAP35398 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RORAP35398 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RORAP35398 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.68■□□□□ 0.1
RORAP35398 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
RORAP35398 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.67■□□□□ 0.1
RORAP35398 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
RORAP35398 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.67■□□□□ 0.1
RORAP35398 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.67■□□□□ 0.1
RORAP35398 MIR943-201ENST00000401286 94 ntBASIC15.67■□□□□ 0.1
RORAP35398 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RORAP35398 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.67■□□□□ 0.1
RORAP35398 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.67■□□□□ 0.1
RORAP35398 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.67■□□□□ 0.1
RORAP35398 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RORAP35398 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.67■□□□□ 0.1
RORAP35398 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.67■□□□□ 0.1
RORAP35398 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.67■□□□□ 0.1
RORAP35398 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.67■□□□□ 0.1
RORAP35398 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms