Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC19.84■□□□□ 0.77
LMNB1P20700 DERL2-202ENST00000570848 657 ntTSL 5 BASIC19.84■□□□□ 0.77
LMNB1P20700 CU634019.7-201ENST00000624153 1185 ntBASIC19.84■□□□□ 0.77
LMNB1P20700 FP236241.2-201ENST00000624906 1185 ntBASIC19.84■□□□□ 0.77
LMNB1P20700 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.84■□□□□ 0.77
LMNB1P20700 AL589702.1-201ENST00000641229 1509 ntBASIC19.84■□□□□ 0.77
LMNB1P20700 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMNB1P20700 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LMNB1P20700 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.84■□□□□ 0.77
LMNB1P20700 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNB1P20700 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LMNB1P20700 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNB1P20700 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNB1P20700 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMNB1P20700 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC19.83■□□□□ 0.77
LMNB1P20700 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LMNB1P20700 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LMNB1P20700 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
LMNB1P20700 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC19.83■□□□□ 0.77
LMNB1P20700 BCRP2-202ENST00000447763 634 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 AC093724.1-201ENST00000448659 1027 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 NME4-207ENST00000450036 985 ntTSL 3 BASIC19.83■□□□□ 0.77
LMNB1P20700 AL139010.1-201ENST00000454878 894 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 BCRP6-201ENST00000510112 632 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 BCRP7-201ENST00000511549 544 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.83■□□□□ 0.77
LMNB1P20700 AP000812.2-201ENST00000538934 718 ntBASIC19.83■□□□□ 0.77
LMNB1P20700 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.83■□□□□ 0.77
LMNB1P20700 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC19.83■□□□□ 0.77
LMNB1P20700 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.83■□□□□ 0.76
LMNB1P20700 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
LMNB1P20700 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.83■□□□□ 0.76
LMNB1P20700 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.83■□□□□ 0.76
LMNB1P20700 AC016396.2-201ENST00000562575 1417 ntBASIC19.83■□□□□ 0.76
LMNB1P20700 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LMNB1P20700 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
LMNB1P20700 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
LMNB1P20700 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 APOA1-205ENST00000375329 927 ntTSL 2 BASIC19.82■□□□□ 0.76
LMNB1P20700 AL442647.2-201ENST00000429864 857 ntBASIC19.82■□□□□ 0.76
LMNB1P20700 HNRNPA1P13-201ENST00000510646 963 ntBASIC19.82■□□□□ 0.76
LMNB1P20700 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC19.82■□□□□ 0.76
LMNB1P20700 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC19.82■□□□□ 0.76
LMNB1P20700 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC19.82■□□□□ 0.76
LMNB1P20700 AC133539.2-201ENST00000604757 467 ntBASIC19.82■□□□□ 0.76
LMNB1P20700 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC19.82■□□□□ 0.76
LMNB1P20700 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LMNB1P20700 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 AL133373.2-201ENST00000623187 2828 ntBASIC19.82■□□□□ 0.76
LMNB1P20700 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LMNB1P20700 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LMNB1P20700 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.82■□□□□ 0.76
LMNB1P20700 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LMNB1P20700 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC19.81■□□□□ 0.76
LMNB1P20700 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC19.81■□□□□ 0.76
LMNB1P20700 KRT8P13-201ENST00000463294 1010 ntBASIC19.81■□□□□ 0.76
LMNB1P20700 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC19.81■□□□□ 0.76
LMNB1P20700 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC19.81■□□□□ 0.76
LMNB1P20700 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
LMNB1P20700 AC012317.2-201ENST00000623305 2251 ntBASIC19.81■□□□□ 0.76
LMNB1P20700 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.81■□□□□ 0.76
LMNB1P20700 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.8■□□□□ 0.76
LMNB1P20700 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.8■□□□□ 0.76
LMNB1P20700 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.8■□□□□ 0.76
LMNB1P20700 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LMNB1P20700 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms