Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.46■□□□□ 0.39
PTPN1P18031 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN1P18031 AL645939.2-201ENST00000427340 991 ntBASIC17.46■□□□□ 0.39
PTPN1P18031 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 AL512356.2-201ENST00000546955 174 ntBASIC17.46■□□□□ 0.39
PTPN1P18031 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.46■□□□□ 0.39
PTPN1P18031 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PTPN1P18031 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC17.46■□□□□ 0.39
PTPN1P18031 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.46■□□□□ 0.39
PTPN1P18031 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN1P18031 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PTPN1P18031 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN1P18031 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PTPN1P18031 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
PTPN1P18031 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PTPN1P18031 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN1P18031 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN1P18031 SPDYE14P-201ENST00000442619 822 ntBASIC17.45■□□□□ 0.38
PTPN1P18031 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 AC098859.1-201ENST00000502915 1238 ntBASIC17.45■□□□□ 0.38
PTPN1P18031 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PTPN1P18031 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.45■□□□□ 0.38
PTPN1P18031 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN1P18031 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.45■□□□□ 0.38
PTPN1P18031 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PTPN1P18031 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PTPN1P18031 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PTPN1P18031 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
PTPN1P18031 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTPN1P18031 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN1P18031 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.44■□□□□ 0.38
PTPN1P18031 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 AC027796.2-201ENST00000575326 344 ntBASIC17.44■□□□□ 0.38
PTPN1P18031 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN1P18031 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.44■□□□□ 0.38
PTPN1P18031 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.44■□□□□ 0.38
PTPN1P18031 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 AP3S2-216ENST00000617003 1561 ntBASIC17.44■□□□□ 0.38
PTPN1P18031 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 AC005622.1-201ENST00000636801 1703 ntBASIC17.44■□□□□ 0.38
PTPN1P18031 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTPN1P18031 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PTPN1P18031 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.43■□□□□ 0.38
PTPN1P18031 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.43■□□□□ 0.38
PTPN1P18031 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTPN1P18031 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms