Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 AC131009.4-201ENST00000624048 1740 ntBASIC16.16■□□□□ 0.18
PCNAP12004 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
PCNAP12004 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.16■□□□□ 0.18
PCNAP12004 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC16.16■□□□□ 0.18
PCNAP12004 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.16■□□□□ 0.18
PCNAP12004 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.16■□□□□ 0.18
PCNAP12004 AP001005.1-201ENST00000571755 1248 ntBASIC16.16■□□□□ 0.18
PCNAP12004 MIR4751-201ENST00000578027 74 ntBASIC16.16■□□□□ 0.18
PCNAP12004 AC091167.2-201ENST00000579581 588 ntBASIC16.16■□□□□ 0.18
PCNAP12004 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 AC129492.6-201ENST00000611383 1305 ntBASIC16.16■□□□□ 0.18
PCNAP12004 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCNAP12004 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCNAP12004 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
PCNAP12004 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
PCNAP12004 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCNAP12004 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCNAP12004 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 AC098831.1-202ENST00000438821 336 ntBASIC16.15■□□□□ 0.18
PCNAP12004 HLA-J-202ENST00000469281 1241 ntBASIC16.15■□□□□ 0.18
PCNAP12004 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.15■□□□□ 0.18
PCNAP12004 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
PCNAP12004 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.15■□□□□ 0.18
PCNAP12004 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.15■□□□□ 0.18
PCNAP12004 AC116407.3-201ENST00000623905 1129 ntBASIC16.15■□□□□ 0.18
PCNAP12004 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 ALOX12P2-203ENST00000570921 1945 ntBASIC16.15■□□□□ 0.18
PCNAP12004 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.15■□□□□ 0.18
PCNAP12004 AL353732.1-201ENST00000569618 1459 ntBASIC16.15■□□□□ 0.18
PCNAP12004 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.15■□□□□ 0.18
PCNAP12004 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCNAP12004 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
PCNAP12004 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.14■□□□□ 0.18
PCNAP12004 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.14■□□□□ 0.17
PCNAP12004 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.14■□□□□ 0.17
PCNAP12004 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms