Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
SP9P0CG40 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SP9P0CG40 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SP9P0CG40 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 AL136982.4-201ENST00000437689 1740 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.02■□□□□ 0.16
SP9P0CG40 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
SP9P0CG40 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.02■□□□□ 0.16
SP9P0CG40 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SP9P0CG40 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 AC012441.1-201ENST00000446669 685 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.02■□□□□ 0.16
SP9P0CG40 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.02■□□□□ 0.16
SP9P0CG40 AC124947.2-201ENST00000547118 1133 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 KRT90P-201ENST00000549264 1064 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 ACTG1P17-201ENST00000558391 1119 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SP9P0CG40 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.02■□□□□ 0.16
SP9P0CG40 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
SP9P0CG40 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
SP9P0CG40 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SP9P0CG40 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.02■□□□□ 0.15
SP9P0CG40 INTS4P2-202ENST00000614726 2019 ntBASIC16.02■□□□□ 0.15
SP9P0CG40 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SP9P0CG40 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.02■□□□□ 0.15
SP9P0CG40 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.15
SP9P0CG40 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.01■□□□□ 0.15
SP9P0CG40 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SP9P0CG40 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.01■□□□□ 0.15
SP9P0CG40 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SP9P0CG40 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 AKR7A2P1-201ENST00000460134 915 ntBASIC16.01■□□□□ 0.15
SP9P0CG40 AC106760.1-201ENST00000508690 800 ntBASIC16.01■□□□□ 0.15
SP9P0CG40 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SP9P0CG40 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.01■□□□□ 0.15
SP9P0CG40 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.01■□□□□ 0.15
SP9P0CG40 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 CLUHP6-201ENST00000580789 941 ntBASIC16.01■□□□□ 0.15
SP9P0CG40 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.01■□□□□ 0.15
SP9P0CG40 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SP9P0CG40 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.01■□□□□ 0.15
SP9P0CG40 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.01■□□□□ 0.15
SP9P0CG40 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SP9P0CG40 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SP9P0CG40 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SP9P0CG40 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16■□□□□ 0.15
SP9P0CG40 RPL13P2-201ENST00000440687 659 ntBASIC16■□□□□ 0.15
SP9P0CG40 RPL13AP25-201ENST00000484130 612 ntBASIC16■□□□□ 0.15
SP9P0CG40 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16■□□□□ 0.15
SP9P0CG40 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16■□□□□ 0.15
SP9P0CG40 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 AL049840.4-201ENST00000602422 811 ntBASIC16■□□□□ 0.15
SP9P0CG40 HCG18-245ENST00000602550 559 ntTSL 4 BASIC16■□□□□ 0.15
SP9P0CG40 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16■□□□□ 0.15
SP9P0CG40 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16■□□□□ 0.15
SP9P0CG40 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16■□□□□ 0.15
SP9P0CG40 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SP9P0CG40 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16■□□□□ 0.15
SP9P0CG40 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms