Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.5■□□□□ 0.55
HOXC6P09630 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
HOXC6P09630 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 TTTY23B-201ENST00000442790 549 ntBASIC18.5■□□□□ 0.55
HOXC6P09630 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.5■□□□□ 0.55
HOXC6P09630 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC18.5■□□□□ 0.55
HOXC6P09630 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 RRP7BP-205ENST00000566851 833 ntBASIC18.5■□□□□ 0.55
HOXC6P09630 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
HOXC6P09630 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.5■□□□□ 0.55
HOXC6P09630 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.5■□□□□ 0.55
HOXC6P09630 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 PCDHB17P-201ENST00000539533 2393 ntBASIC18.5■□□□□ 0.55
HOXC6P09630 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HOXC6P09630 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
HOXC6P09630 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
HOXC6P09630 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
HOXC6P09630 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HOXC6P09630 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HOXC6P09630 AL589987.1-201ENST00000453380 819 ntBASIC18.49■□□□□ 0.55
HOXC6P09630 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.49■□□□□ 0.55
HOXC6P09630 AC123567.1-201ENST00000548294 1261 ntBASIC18.49■□□□□ 0.55
HOXC6P09630 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.49■□□□□ 0.55
HOXC6P09630 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
HOXC6P09630 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC18.49■□□□□ 0.55
HOXC6P09630 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 AC093726.1-201ENST00000608064 963 ntBASIC18.49■□□□□ 0.55
HOXC6P09630 AL109936.8-201ENST00000641772 604 ntBASIC18.49■□□□□ 0.55
HOXC6P09630 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
HOXC6P09630 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.49■□□□□ 0.55
HOXC6P09630 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
HOXC6P09630 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
HOXC6P09630 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
HOXC6P09630 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.48■□□□□ 0.55
HOXC6P09630 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
HOXC6P09630 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18.48■□□□□ 0.55
HOXC6P09630 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
HOXC6P09630 AC098850.1-201ENST00000419919 790 ntBASIC18.48■□□□□ 0.55
HOXC6P09630 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.48■□□□□ 0.55
HOXC6P09630 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC6P09630 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC6P09630 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC6P09630 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.48■□□□□ 0.55
HOXC6P09630 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HOXC6P09630 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.48■□□□□ 0.55
HOXC6P09630 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18.48■□□□□ 0.55
HOXC6P09630 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms