Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.09■□□□□ 0.49
CLTAP09496 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CLTAP09496 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLTAP09496 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.09■□□□□ 0.49
CLTAP09496 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 TIMM8BP1-201ENST00000452384 211 ntBASIC18.09■□□□□ 0.49
CLTAP09496 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.09■□□□□ 0.49
CLTAP09496 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.09■□□□□ 0.49
CLTAP09496 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.09■□□□□ 0.49
CLTAP09496 AC243562.1-201ENST00000560672 389 ntBASIC18.09■□□□□ 0.49
CLTAP09496 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.09■□□□□ 0.49
CLTAP09496 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.09■□□□□ 0.49
CLTAP09496 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.09■□□□□ 0.49
CLTAP09496 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CLTAP09496 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.09■□□□□ 0.49
CLTAP09496 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.09■□□□□ 0.49
CLTAP09496 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.09■□□□□ 0.49
CLTAP09496 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC18.09■□□□□ 0.49
CLTAP09496 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CLTAP09496 AC016027.1-202ENST00000607927 1699 ntBASIC18.09■□□□□ 0.49
CLTAP09496 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLTAP09496 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLTAP09496 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.08■□□□□ 0.49
CLTAP09496 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLTAP09496 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLTAP09496 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CLTAP09496 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLTAP09496 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLTAP09496 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CLTAP09496 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
CLTAP09496 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.08■□□□□ 0.49
CLTAP09496 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
CLTAP09496 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CLTAP09496 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
CLTAP09496 AC004461.1-201ENST00000412461 403 ntBASIC18.08■□□□□ 0.48
CLTAP09496 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.08■□□□□ 0.48
CLTAP09496 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.08■□□□□ 0.48
CLTAP09496 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLTAP09496 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.08■□□□□ 0.48
CLTAP09496 AC004835.2-201ENST00000603762 682 ntBASIC18.08■□□□□ 0.48
CLTAP09496 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLTAP09496 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.08■□□□□ 0.48
CLTAP09496 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.08■□□□□ 0.48
CLTAP09496 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CLTAP09496 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.08■□□□□ 0.48
CLTAP09496 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.08■□□□□ 0.48
CLTAP09496 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CLTAP09496 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 AC068418.2-201ENST00000577309 3703 ntBASIC18.07■□□□□ 0.48
CLTAP09496 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.07■□□□□ 0.48
CLTAP09496 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.07■□□□□ 0.48
CLTAP09496 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLTAP09496 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms