Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.12■□□□□ 0.33
CD48P09326 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.12■□□□□ 0.33
CD48P09326 MIR3909-201ENST00000579518 119 ntBASIC17.12■□□□□ 0.33
CD48P09326 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CD48P09326 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.12■□□□□ 0.33
CD48P09326 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CD48P09326 AL009183.1-201ENST00000603760 355 ntBASIC17.12■□□□□ 0.33
CD48P09326 AC021097.1-201ENST00000607902 574 ntBASIC17.12■□□□□ 0.33
CD48P09326 AL513190.1-201ENST00000621254 727 ntBASIC17.12■□□□□ 0.33
CD48P09326 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 AC005622.1-201ENST00000636801 1703 ntBASIC17.12■□□□□ 0.33
CD48P09326 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.12■□□□□ 0.33
CD48P09326 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.12■□□□□ 0.33
CD48P09326 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CD48P09326 AC010491.1-201ENST00000563101 2797 ntBASIC17.11■□□□□ 0.33
CD48P09326 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 AL596257.1-201ENST00000641463 2694 ntBASIC17.11■□□□□ 0.33
CD48P09326 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.11■□□□□ 0.33
CD48P09326 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.11■□□□□ 0.33
CD48P09326 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.11■□□□□ 0.33
CD48P09326 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.11■□□□□ 0.33
CD48P09326 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.11■□□□□ 0.33
CD48P09326 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.11■□□□□ 0.33
CD48P09326 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.11■□□□□ 0.33
CD48P09326 AC007064.4-201ENST00000637740 555 ntBASIC17.11■□□□□ 0.33
CD48P09326 AC092865.6-201ENST00000642101 219 ntBASIC17.11■□□□□ 0.33
CD48P09326 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CD48P09326 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 MST1L-201ENST00000442552 2185 ntBASIC17.11■□□□□ 0.33
CD48P09326 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CD48P09326 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.11■□□□□ 0.33
CD48P09326 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 AL513477.1-201ENST00000602865 2407 ntBASIC17.1■□□□□ 0.33
CD48P09326 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.1■□□□□ 0.33
CD48P09326 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.1■□□□□ 0.33
CD48P09326 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CD48P09326 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 AC106730.1-201ENST00000566722 1090 ntBASIC17.1■□□□□ 0.33
CD48P09326 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 AC140113.2-201ENST00000604370 208 ntBASIC17.1■□□□□ 0.33
CD48P09326 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.1■□□□□ 0.33
CD48P09326 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.1■□□□□ 0.33
CD48P09326 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CD48P09326 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CD48P09326 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CD48P09326 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CD48P09326 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.09■□□□□ 0.33
CD48P09326 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
CD48P09326 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CD48P09326 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms