Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
THBS1P07996 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS1P07996 IGLL3P-201ENST00000412472 434 ntBASIC15.22■□□□□ 0.03
THBS1P07996 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 HCG4B-203ENST00000450128 991 ntBASIC15.22■□□□□ 0.03
THBS1P07996 AC017007.3-201ENST00000479865 435 ntBASIC15.22■□□□□ 0.03
THBS1P07996 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS1P07996 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS1P07996 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.22■□□□□ 0.03
THBS1P07996 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
THBS1P07996 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
THBS1P07996 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
THBS1P07996 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
THBS1P07996 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THBS1P07996 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS1P07996 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THBS1P07996 RNA5SP415-201ENST00000517246 115 ntBASIC15.21■□□□□ 0.03
THBS1P07996 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 CD63-204ENST00000546939 779 ntTSL 3 BASIC15.21■□□□□ 0.03
THBS1P07996 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.21■□□□□ 0.03
THBS1P07996 AC096734.2-201ENST00000562054 433 ntBASIC15.21■□□□□ 0.03
THBS1P07996 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.21■□□□□ 0.03
THBS1P07996 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.21■□□□□ 0.03
THBS1P07996 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS1P07996 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.21■□□□□ 0.03
THBS1P07996 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
THBS1P07996 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
THBS1P07996 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
THBS1P07996 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THBS1P07996 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
THBS1P07996 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
THBS1P07996 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
THBS1P07996 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
THBS1P07996 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
THBS1P07996 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
THBS1P07996 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
THBS1P07996 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.2■□□□□ 0.02
THBS1P07996 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.2■□□□□ 0.02
THBS1P07996 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms