Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.5□□□□□ -0.09
LCATP04180 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
LCATP04180 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LCATP04180 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.5□□□□□ -0.09
LCATP04180 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 AC005052.1-201ENST00000625181 2492 ntBASIC14.5□□□□□ -0.09
LCATP04180 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.5□□□□□ -0.09
LCATP04180 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.5□□□□□ -0.09
LCATP04180 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 AL031731.1-201ENST00000642131 2094 ntBASIC14.5□□□□□ -0.09
LCATP04180 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCATP04180 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LCATP04180 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LCATP04180 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 HLA-A-201ENST00000376802 1334 ntBASIC14.49□□□□□ -0.09
LCATP04180 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LCATP04180 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 AC009947.1-201ENST00000444350 727 ntBASIC14.49□□□□□ -0.09
LCATP04180 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.49□□□□□ -0.09
LCATP04180 AL513480.1-201ENST00000451731 511 ntBASIC14.49□□□□□ -0.09
LCATP04180 AC079776.4-201ENST00000511039 504 ntBASIC14.49□□□□□ -0.09
LCATP04180 RNA5SP419-201ENST00000515908 135 ntBASIC14.49□□□□□ -0.09
LCATP04180 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
LCATP04180 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.49□□□□□ -0.09
LCATP04180 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.49□□□□□ -0.09
LCATP04180 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 GGT3P-204ENST00000453783 1664 ntBASIC14.49□□□□□ -0.09
LCATP04180 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.49□□□□□ -0.09
LCATP04180 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.49□□□□□ -0.09
LCATP04180 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LCATP04180 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.48□□□□□ -0.09
LCATP04180 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.48□□□□□ -0.09
LCATP04180 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.48□□□□□ -0.09
LCATP04180 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LCATP04180 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 ME2P1-201ENST00000426028 1970 ntBASIC14.48□□□□□ -0.09
LCATP04180 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.48□□□□□ -0.09
LCATP04180 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LCATP04180 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC14.48□□□□□ -0.09
LCATP04180 MIR4515-201ENST00000584082 81 ntBASIC14.48□□□□□ -0.09
LCATP04180 KLK8-205ENST00000593490 267 ntTSL 3 BASIC14.48□□□□□ -0.09
LCATP04180 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LCATP04180 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.48□□□□□ -0.09
LCATP04180 ACTL9-202ENST00000612068 1252 ntBASIC14.48□□□□□ -0.09
LCATP04180 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms