Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AK4P3-201ENST00000418260 669 ntBASIC14.29□□□□□ -0.12
HLA-DQB1P01920 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 AC232323.1-201ENST00000540724 2099 ntBASIC14.29□□□□□ -0.12
HLA-DQB1P01920 REXO1L5P-201ENST00000622260 2098 ntBASIC14.29□□□□□ -0.12
HLA-DQB1P01920 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.29□□□□□ -0.12
HLA-DQB1P01920 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 SPDYE13P-201ENST00000445314 798 ntBASIC14.28□□□□□ -0.12
HLA-DQB1P01920 AC092647.4-201ENST00000457211 535 ntBASIC14.28□□□□□ -0.12
HLA-DQB1P01920 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 AC006011.2-201ENST00000621313 1158 ntBASIC14.28□□□□□ -0.12
HLA-DQB1P01920 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DQB1P01920 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DQB1P01920 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms