Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
ALDH1A1P00352 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
ALDH1A1P00352 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 SOCS2P1-201ENST00000417727 557 ntBASIC18.59■□□□□ 0.57
ALDH1A1P00352 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 AP001258.2-201ENST00000529891 490 ntBASIC18.59■□□□□ 0.57
ALDH1A1P00352 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 AL365330.1-201ENST00000607459 531 ntBASIC18.59■□□□□ 0.57
ALDH1A1P00352 AL022328.3-201ENST00000607943 679 ntBASIC18.59■□□□□ 0.57
ALDH1A1P00352 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 BX323043.1-201ENST00000641006 1765 ntBASIC18.59■□□□□ 0.57
ALDH1A1P00352 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.59■□□□□ 0.57
ALDH1A1P00352 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ALDH1A1P00352 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC18.58■□□□□ 0.57
ALDH1A1P00352 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
ALDH1A1P00352 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ALDH1A1P00352 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.58■□□□□ 0.56
ALDH1A1P00352 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 AC134915.1-201ENST00000426461 574 ntBASIC18.58■□□□□ 0.56
ALDH1A1P00352 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
ALDH1A1P00352 FAM86LP-201ENST00000478302 853 ntBASIC18.58■□□□□ 0.56
ALDH1A1P00352 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 RHOXF1P1-202ENST00000635473 501 ntBASIC18.58■□□□□ 0.56
ALDH1A1P00352 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ALDH1A1P00352 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 CYP4F24P-201ENST00000586049 1580 ntBASIC18.57■□□□□ 0.56
ALDH1A1P00352 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 BAATP1-201ENST00000412284 1225 ntBASIC18.57■□□□□ 0.56
ALDH1A1P00352 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ALDH1A1P00352 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC18.57■□□□□ 0.56
ALDH1A1P00352 AL118558.3-201ENST00000607414 1079 ntBASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms