Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 AL671277.2-201ENST00000458060 996 ntBASIC18.98■□□□□ 0.63
MBD3O95983 AC091167.2-201ENST00000579581 588 ntBASIC18.98■□□□□ 0.63
MBD3O95983 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 AC010331.1-201ENST00000611423 582 ntBASIC18.98■□□□□ 0.63
MBD3O95983 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.98■□□□□ 0.63
MBD3O95983 PGM5P2-202ENST00000637225 1043 ntBASIC18.98■□□□□ 0.63
MBD3O95983 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.98■□□□□ 0.63
MBD3O95983 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
MBD3O95983 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.98■□□□□ 0.63
MBD3O95983 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.97■□□□□ 0.63
MBD3O95983 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.97■□□□□ 0.63
MBD3O95983 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.97■□□□□ 0.63
MBD3O95983 AC096582.2-201ENST00000510860 516 ntBASIC18.97■□□□□ 0.63
MBD3O95983 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.97■□□□□ 0.63
MBD3O95983 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.97■□□□□ 0.63
MBD3O95983 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
MBD3O95983 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
MBD3O95983 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
MBD3O95983 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 AC092919.2-201ENST00000623631 1645 ntBASIC18.96■□□□□ 0.63
MBD3O95983 AC079776.2-201ENST00000641154 1609 ntBASIC18.96■□□□□ 0.63
MBD3O95983 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.96■□□□□ 0.63
MBD3O95983 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
MBD3O95983 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 RCN1P2-201ENST00000398357 915 ntBASIC18.96■□□□□ 0.63
MBD3O95983 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
MBD3O95983 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
MBD3O95983 NTF6B-201ENST00000591913 560 ntBASIC18.96■□□□□ 0.63
MBD3O95983 BNIP3P18-201ENST00000593976 575 ntBASIC18.96■□□□□ 0.63
MBD3O95983 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.96■□□□□ 0.63
MBD3O95983 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.96■□□□□ 0.63
MBD3O95983 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
MBD3O95983 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
MBD3O95983 AC131009.4-201ENST00000624048 1740 ntBASIC18.96■□□□□ 0.63
MBD3O95983 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 AC006486.2-201ENST00000624246 2199 ntBASIC18.96■□□□□ 0.63
MBD3O95983 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.96■□□□□ 0.63
MBD3O95983 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.96■□□□□ 0.63
MBD3O95983 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
MBD3O95983 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.96■□□□□ 0.63
MBD3O95983 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
MBD3O95983 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 AC020658.6-201ENST00000623564 1870 ntBASIC18.95■□□□□ 0.62
MBD3O95983 TMBIM7P-203ENST00000641617 1718 ntBASIC18.95■□□□□ 0.62
MBD3O95983 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.95■□□□□ 0.62
MBD3O95983 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
MBD3O95983 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.95■□□□□ 0.62
MBD3O95983 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.95■□□□□ 0.62
MBD3O95983 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.95■□□□□ 0.62
MBD3O95983 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.95■□□□□ 0.62
MBD3O95983 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.95■□□□□ 0.62
MBD3O95983 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
MBD3O95983 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms