Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 KRT8P10-201ENST00000450021 1447 ntBASIC13.88□□□□□ -0.19
SIX6O95475 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.88□□□□□ -0.19
SIX6O95475 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.88□□□□□ -0.19
SIX6O95475 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SIX6O95475 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
SIX6O95475 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SIX6O95475 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SIX6O95475 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SIX6O95475 AC007967.3-201ENST00000434308 558 ntBASIC13.87□□□□□ -0.19
SIX6O95475 KRT18P48-201ENST00000434763 852 ntBASIC13.87□□□□□ -0.19
SIX6O95475 APTR-205ENST00000447009 902 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SIX6O95475 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.87□□□□□ -0.19
SIX6O95475 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SIX6O95475 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.87□□□□□ -0.19
SIX6O95475 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SIX6O95475 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.87□□□□□ -0.19
SIX6O95475 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.87□□□□□ -0.19
SIX6O95475 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
SIX6O95475 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.86□□□□□ -0.19
SIX6O95475 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.86□□□□□ -0.19
SIX6O95475 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
SIX6O95475 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SIX6O95475 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms