Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SCN2BO60939 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCN2BO60939 AC010491.1-201ENST00000563101 2797 ntBASIC15.7■□□□□ 0.1
SCN2BO60939 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SCN2BO60939 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
SCN2BO60939 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 PAUPAR-201ENST00000630360 2965 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC15.69■□□□□ 0.1
SCN2BO60939 AC018712.1-201ENST00000455767 687 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.69■□□□□ 0.1
SCN2BO60939 AC012640.2-201ENST00000561606 901 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.69■□□□□ 0.1
SCN2BO60939 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 TP73-AS1-207ENST00000624167 988 ntBASIC15.69■□□□□ 0.1
SCN2BO60939 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.69■□□□□ 0.1
SCN2BO60939 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SCN2BO60939 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SCN2BO60939 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.68■□□□□ 0.1
SCN2BO60939 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SCN2BO60939 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.68■□□□□ 0.1
SCN2BO60939 AP001350.2-201ENST00000625104 1094 ntBASIC15.68■□□□□ 0.1
SCN2BO60939 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.68■□□□□ 0.1
SCN2BO60939 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.68■□□□□ 0.1
SCN2BO60939 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SCN2BO60939 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SCN2BO60939 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCN2BO60939 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SCN2BO60939 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
SCN2BO60939 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.67■□□□□ 0.1
SCN2BO60939 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SCN2BO60939 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC15.67■□□□□ 0.1
SCN2BO60939 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms