Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IDH3BO43837 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
IDH3BO43837 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 AC004817.3-201ENST00000602957 2129 ntBASIC15.26■□□□□ 0.03
IDH3BO43837 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
IDH3BO43837 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
IDH3BO43837 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 KRT16P4-201ENST00000453883 522 ntBASIC15.26■□□□□ 0.03
IDH3BO43837 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.26■□□□□ 0.03
IDH3BO43837 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.26■□□□□ 0.03
IDH3BO43837 AP000867.3-201ENST00000524675 377 ntBASIC15.26■□□□□ 0.03
IDH3BO43837 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.26■□□□□ 0.03
IDH3BO43837 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 AL139011.1-202ENST00000642063 584 ntBASIC15.26■□□□□ 0.03
IDH3BO43837 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
IDH3BO43837 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IDH3BO43837 KRT8P49-201ENST00000604166 1432 ntBASIC15.26■□□□□ 0.03
IDH3BO43837 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 AL009178.2-201ENST00000597278 2719 ntBASIC15.25■□□□□ 0.03
IDH3BO43837 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.25■□□□□ 0.03
IDH3BO43837 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.25■□□□□ 0.03
IDH3BO43837 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.25■□□□□ 0.03
IDH3BO43837 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.25■□□□□ 0.03
IDH3BO43837 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.25■□□□□ 0.03
IDH3BO43837 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.25■□□□□ 0.03
IDH3BO43837 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
IDH3BO43837 CICP13-201ENST00000422015 2789 ntBASIC15.24■□□□□ 0.03
IDH3BO43837 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
IDH3BO43837 AC006538.1-201ENST00000567905 1585 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms