Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
MSI1O43347 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.14■□□□□ 0.33
MSI1O43347 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
MSI1O43347 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 MIR346-201ENST00000362234 95 ntBASIC17.13■□□□□ 0.33
MSI1O43347 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.13■□□□□ 0.33
MSI1O43347 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 RBPMS2P1-201ENST00000437762 623 ntBASIC17.13■□□□□ 0.33
MSI1O43347 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.13■□□□□ 0.33
MSI1O43347 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.13■□□□□ 0.33
MSI1O43347 AC105233.2-201ENST00000523697 349 ntBASIC17.13■□□□□ 0.33
MSI1O43347 AF228730.5-201ENST00000530288 346 ntBASIC17.13■□□□□ 0.33
MSI1O43347 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.13■□□□□ 0.33
MSI1O43347 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
MSI1O43347 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.13■□□□□ 0.33
MSI1O43347 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 PCDHA14-201ENST00000506751 2298 ntBASIC17.13■□□□□ 0.33
MSI1O43347 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
MSI1O43347 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
MSI1O43347 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
MSI1O43347 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.12■□□□□ 0.33
MSI1O43347 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 HLA-J-203ENST00000494367 1087 ntBASIC17.12■□□□□ 0.33
MSI1O43347 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 AC004449.1-201ENST00000564240 433 ntBASIC17.12■□□□□ 0.33
MSI1O43347 AC073389.1-201ENST00000595595 795 ntBASIC17.12■□□□□ 0.33
MSI1O43347 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 AC084121.4-201ENST00000641598 221 ntBASIC17.12■□□□□ 0.33
MSI1O43347 AF228730.8-201ENST00000642140 221 ntBASIC17.12■□□□□ 0.33
MSI1O43347 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
MSI1O43347 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.12■□□□□ 0.33
MSI1O43347 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
MSI1O43347 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.11■□□□□ 0.33
MSI1O43347 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
MSI1O43347 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.11■□□□□ 0.33
MSI1O43347 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.11■□□□□ 0.33
MSI1O43347 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.11■□□□□ 0.33
MSI1O43347 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms