Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SOCS3O14543 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC12.48□□□□□ -0.41
SOCS3O14543 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SOCS3O14543 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SOCS3O14543 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SOCS3O14543 AC006449.6-201ENST00000612330 2296 ntBASIC12.48□□□□□ -0.41
SOCS3O14543 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SOCS3O14543 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 PCDHA1-201ENST00000378133 2726 ntBASIC12.47□□□□□ -0.41
SOCS3O14543 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.47□□□□□ -0.41
SOCS3O14543 HCG4B-203ENST00000450128 991 ntBASIC12.47□□□□□ -0.41
SOCS3O14543 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 AC093909.1-201ENST00000504731 1122 ntBASIC12.47□□□□□ -0.41
SOCS3O14543 RNA5SP415-201ENST00000517246 115 ntBASIC12.47□□□□□ -0.41
SOCS3O14543 AL662844.1-201ENST00000546340 181 ntBASIC12.47□□□□□ -0.41
SOCS3O14543 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC12.47□□□□□ -0.41
SOCS3O14543 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC12.47□□□□□ -0.41
SOCS3O14543 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
SOCS3O14543 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.47□□□□□ -0.41
SOCS3O14543 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 AC022188.1-201ENST00000620960 1664 ntBASIC12.46□□□□□ -0.41
SOCS3O14543 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 BLK-205ENST00000529894 2017 ntTSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
SOCS3O14543 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.46□□□□□ -0.41
SOCS3O14543 PP7080-204ENST00000510714 601 ntTSL 3 BASIC12.46□□□□□ -0.41
SOCS3O14543 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.46□□□□□ -0.41
SOCS3O14543 AL031432.2-201ENST00000566714 459 ntBASIC12.46□□□□□ -0.41
SOCS3O14543 AL928711.1-201ENST00000570165 459 ntBASIC12.46□□□□□ -0.41
SOCS3O14543 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
SOCS3O14543 AL031055.1-201ENST00000606362 631 ntBASIC12.46□□□□□ -0.41
SOCS3O14543 AC021097.1-201ENST00000607902 574 ntBASIC12.46□□□□□ -0.41
SOCS3O14543 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.46□□□□□ -0.41
SOCS3O14543 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
SOCS3O14543 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
SOCS3O14543 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
SOCS3O14543 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms