Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK2O00526 TOLLIP-AS1-201ENST00000530897 939 ntBASIC13.28□□□□□ -0.28
UPK2O00526 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.28□□□□□ -0.28
UPK2O00526 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.28□□□□□ -0.28
UPK2O00526 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK2O00526 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.28□□□□□ -0.28
UPK2O00526 AC005593.1-201ENST00000624894 515 ntBASIC13.28□□□□□ -0.28
UPK2O00526 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
UPK2O00526 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
UPK2O00526 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
UPK2O00526 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UPK2O00526 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK2O00526 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
UPK2O00526 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
UPK2O00526 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.28□□□□□ -0.28
UPK2O00526 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.27□□□□□ -0.28
UPK2O00526 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK2O00526 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.27□□□□□ -0.28
UPK2O00526 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
UPK2O00526 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
UPK2O00526 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
UPK2O00526 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
UPK2O00526 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 FAM197Y8-203ENST00000450145 560 ntBASIC13.27□□□□□ -0.29
UPK2O00526 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK2O00526 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.27□□□□□ -0.29
UPK2O00526 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.27□□□□□ -0.29
UPK2O00526 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 AL139384.1-201ENST00000612143 3047 ntBASIC13.27□□□□□ -0.29
UPK2O00526 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
UPK2O00526 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.27□□□□□ -0.29
UPK2O00526 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
UPK2O00526 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
UPK2O00526 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.26□□□□□ -0.29
UPK2O00526 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
UPK2O00526 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
UPK2O00526 RPS2P28-201ENST00000314255 741 ntBASIC13.26□□□□□ -0.29
UPK2O00526 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.26□□□□□ -0.29
UPK2O00526 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
UPK2O00526 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms