Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MEIS3P1A6NDR6 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AC087499.1-201ENST00000418141 1075 ntBASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 TSPY22P-201ENST00000427496 604 ntBASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 BX664615.1-201ENST00000443558 458 ntBASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MEIS3P1A6NDR6 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AL353801.3-201ENST00000609898 542 ntBASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MEIS3P1A6NDR6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms