Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC012313.1-201ENST00000593393 3059 ntBASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 COX5BP8-201ENST00000416911 349 ntBASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC007274.1-201ENST00000439805 662 ntBASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC245100.5-201ENST00000452108 331 ntBASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 API5-211ENST00000534695 560 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC140912.1-201ENST00000577171 1054 ntBASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC144AA2RUR9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 PAM16-215ENST00000577031 548 ntTSL 4 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 AC027307.3-201ENST00000594262 1100 ntBASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 AL592424.1-201ENST00000563624 1536 ntBASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 AC080080.1-201ENST00000625121 2420 ntBASIC23.47■■□□□ 1.35
CCDC144AA2RUR9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 MEIS3P1-201ENST00000495167 958 ntBASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 TEX48-202ENST00000612244 662 ntTSL 3 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 AL358472.5-202ENST00000641448 1267 ntBASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CCDC144AA2RUR9 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC23.45■■□□□ 1.35
CCDC144AA2RUR9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
CCDC144AA2RUR9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.35
CCDC144AA2RUR9 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 DFFBP1-201ENST00000433250 979 ntBASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 EEF1DP4-201ENST00000446006 880 ntBASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC23.45■■□□□ 1.34
CCDC144AA2RUR9 AL596325.1-201ENST00000563991 1082 ntBASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms