Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 AC233702.3-201ENST00000578656 1387 ntBASIC17.99■□□□□ 0.47
CCDC66A2RUB6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC66A2RUB6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TUBB8P12-201ENST00000308911 1335 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TUBB7P-202ENST00000428444 1305 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TUBB8P7-204ENST00000567960 1332 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 INTS4P1-201ENST00000438455 1935 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 Z69720.1-201ENST00000601483 472 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AC092171.3-201ENST00000610122 2651 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AC007326.2-201ENST00000624224 7579 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AC022532.1-201ENST00000624563 1728 ntBASIC17.98■□□□□ 0.47
CCDC66A2RUB6 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC66A2RUB6 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 PMPCAP1-201ENST00000508114 1576 ntBASIC17.97■□□□□ 0.47
CCDC66A2RUB6 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.97■□□□□ 0.47
CCDC66A2RUB6 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms