Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AL031133.1-201ENST00000406807 723 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 CIB2-208ENST00000560618 804 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC074051.2-201ENST00000565115 352 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AP002414.4-201ENST00000589764 1148 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC064862.7-201ENST00000604520 867 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC114341.1-201ENST00000618070 349 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 ABBA01031661.1-201ENST00000634362 1253 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 AC079776.2-201ENST00000641154 1609 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 TOP3BP1-201ENST00000420768 1380 ntBASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.9□□□□□ -0.34
TRAV5A0A0B4J249 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
TRAV5A0A0B4J249 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AL365209.1-201ENST00000624418 6473 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 DRAXINP1-201ENST00000437611 948 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AP002383.4-201ENST00000442518 975 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ABCD1P5-201ENST00000445663 754 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 COX5A-202ENST00000562233 441 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AP005117.1-202ENST00000581724 1908 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 AP003680.1-201ENST00000598970 3660 ntBASIC12.89□□□□□ -0.35
TRAV5A0A0B4J249 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 KRT8P39-201ENST00000396270 1433 ntBASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
TRAV5A0A0B4J249 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms