Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
DDX49Q9Y6V7 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 AL365203.3-201ENST00000609742 2057 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 HLA-A-202ENST00000376806 1854 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 KLF4P1-201ENST00000412782 1185 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 MIR1199-201ENST00000621445 119 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 AC005593.1-201ENST00000624894 515 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 AC092865.6-201ENST00000642101 219 ntBASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.93■□□□□ 0.78
DDX49Q9Y6V7 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 RNA5SP416-201ENST00000516838 111 ntBASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 AC018845.2-201ENST00000568326 409 ntBASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 AC006557.2-201ENST00000592985 1240 ntBASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.92■□□□□ 0.78
DDX49Q9Y6V7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
DDX49Q9Y6V7 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms