Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.53■□□□□ 0.24
PCDHB1Q9Y5F3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AL031731.1-201ENST00000642131 2094 ntBASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 FAM86GP-201ENST00000448322 971 ntBASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AL513480.1-201ENST00000451731 511 ntBASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 AC138761.1-201ENST00000584393 385 ntBASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PCDHB1Q9Y5F3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PCDHB1Q9Y5F3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 ME2P1-201ENST00000426028 1970 ntBASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GGT4P-201ENST00000623672 1708 ntBASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 AC244107.1-201ENST00000442033 332 ntBASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 TIMM8BP1-201ENST00000452384 211 ntBASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PCDHB1Q9Y5F3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PCDHB1Q9Y5F3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms