Protein–RNA interactions for Protein: Q9Y2A7

NCKAP1, Nck-associated protein 1, humanhuman

Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1Q9Y2A7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCKAP1Q9Y2A7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 LINC02560-201ENST00000596379 459 ntBASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 AC020765.3-201ENST00000613051 740 ntBASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.53■□□□□ 0.24
NCKAP1Q9Y2A7 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 UGT1A2P-201ENST00000454886 866 ntBASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 AL590560.3-201ENST00000623350 461 ntBASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 AC008761.3-201ENST00000624803 892 ntBASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NCKAP1Q9Y2A7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 AC100757.3-201ENST00000622361 1406 ntBASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 AC141586.5-201ENST00000624546 2050 ntBASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NCKAP1Q9Y2A7 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.51■□□□□ 0.23
NCKAP1Q9Y2A7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms