Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 AL359881.2-201ENST00000602973 570 ntBASIC20.88■□□□□ 0.93
SCN11AQ9UI33 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SCN11AQ9UI33 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 FUZ-207ENST00000526575 482 ntTSL 4 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 TMEM261P1-201ENST00000604899 340 ntBASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AL691432.1-201ENST00000596308 1422 ntBASIC20.87■□□□□ 0.93
SCN11AQ9UI33 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 BRI3BPP1-201ENST00000594224 787 ntBASIC20.87■□□□□ 0.93
SCN11AQ9UI33 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SCN11AQ9UI33 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 HNRNPUP1-201ENST00000554987 333 ntBASIC20.86■□□□□ 0.93
SCN11AQ9UI33 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 SERF2-217ENST00000630046 862 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SCN11AQ9UI33 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 REXO1L8P-201ENST00000604378 1897 ntBASIC20.85■□□□□ 0.93
SCN11AQ9UI33 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCN11AQ9UI33 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms