Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.18■□□□□ 0.5
CALCOCO1Q9P1Z2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 KLF4P1-201ENST00000412782 1185 ntBASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 BX005266.1-201ENST00000473402 457 ntBASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 STK19B-204ENST00000512515 211 ntBASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 NKAPP1-205ENST00000585790 367 ntBASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALCOCO1Q9P1Z2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SIGLEC16-201ENST00000599858 1437 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 AC003669.1-201ENST00000334569 611 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 MYCLP1-201ENST00000372451 1075 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SLC25A1P3-201ENST00000395415 828 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 KRT18P58-201ENST00000527480 1120 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.16■□□□□ 0.5
CALCOCO1Q9P1Z2 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 AL365203.3-201ENST00000609742 2057 ntBASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 KRT18P13-201ENST00000400056 1290 ntBASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.15■□□□□ 0.5
CALCOCO1Q9P1Z2 FAM215A-202ENST00000632077 792 ntBASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms