Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.66■□□□□ 0.1
VAPAQ9P0L0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AC087641.1-201ENST00000557561 1021 ntBASIC15.66■□□□□ 0.1
VAPAQ9P0L0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AC091076.1-201ENST00000610741 619 ntBASIC15.66■□□□□ 0.1
VAPAQ9P0L0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VAPAQ9P0L0 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AC008608.2-201ENST00000606089 416 ntBASIC15.65■□□□□ 0.1
VAPAQ9P0L0 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AC093458.2-201ENST00000623150 629 ntBASIC15.65■□□□□ 0.1
VAPAQ9P0L0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 AC069224.1-201ENST00000566372 1715 ntBASIC15.65■□□□□ 0.1
VAPAQ9P0L0 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
VAPAQ9P0L0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.64■□□□□ 0.09
VAPAQ9P0L0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms