Protein–RNA interactions for Protein: Q9NYR8

RDH8, Retinol dehydrogenase 8, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH8Q9NYR8 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RDH8Q9NYR8 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 RN7SL606P-201ENST00000472779 293 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC122714.2-201ENST00000502787 707 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 LINC01238-205ENST00000567549 1107 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 IGHV3-41-201ENST00000613121 348 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 AC073347.1-201ENST00000421633 2643 ntBASIC14.37□□□□□ -0.11
RDH8Q9NYR8 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
RDH8Q9NYR8 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 OR2I1P-209ENST00000641730 5365 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 FAM220CP-201ENST00000395253 831 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 AC103564.2-201ENST00000432853 1299 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 AC011840.4-201ENST00000578471 627 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 AC090616.6-201ENST00000582640 721 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 AL138831.2-201ENST00000606564 490 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.36□□□□□ -0.11
RDH8Q9NYR8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RDH8Q9NYR8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms