Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC243562.1-201ENST00000560672 389 ntBASIC17.6■□□□□ 0.41
CISHQ9NSE2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 AL138918.1-201ENST00000568306 659 ntBASIC17.6■□□□□ 0.41
CISHQ9NSE2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CISHQ9NSE2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
CISHQ9NSE2 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 KRT18P13-201ENST00000400056 1290 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 AC093724.1-201ENST00000448659 1027 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 SPDYE11-202ENST00000450699 704 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 RN7SL589P-201ENST00000481268 310 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 PRYP6-201ENST00000514804 343 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 SPDYE9P-201ENST00000570642 692 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 SPDYE10P-202ENST00000612005 668 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 SPDYE8P-202ENST00000612377 668 ntBASIC17.59■□□□□ 0.41
CISHQ9NSE2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.59■□□□□ 0.41
CISHQ9NSE2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CISHQ9NSE2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.58■□□□□ 0.41
CISHQ9NSE2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CISHQ9NSE2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.58■□□□□ 0.41
CISHQ9NSE2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CISHQ9NSE2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CISHQ9NSE2 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 TIMM8BP1-201ENST00000452384 211 ntBASIC17.58■□□□□ 0.4
CISHQ9NSE2 AC079140.1-201ENST00000508039 487 ntBASIC17.58■□□□□ 0.4
CISHQ9NSE2 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.58■□□□□ 0.4
CISHQ9NSE2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms