Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 AL592424.1-201ENST00000563624 1536 ntBASIC15.81■□□□□ 0.12
BRF2Q9HAW0 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 AL009183.1-201ENST00000603760 355 ntBASIC15.81■□□□□ 0.12
BRF2Q9HAW0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
BRF2Q9HAW0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 U82695.1-201ENST00000635752 1889 ntBASIC15.8■□□□□ 0.12
BRF2Q9HAW0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 AL365203.3-201ENST00000609742 2057 ntBASIC15.8■□□□□ 0.12
BRF2Q9HAW0 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
BRF2Q9HAW0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
BRF2Q9HAW0 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms