Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AC241585.1-201ENST00000433527 519 ntBASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 AC105021.1-202ENST00000570572 669 ntBASIC17.77■□□□□ 0.44
NXF3Q9H4D5 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.77■□□□□ 0.44
NXF3Q9H4D5 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.43
NXF3Q9H4D5 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AC236430.1-201ENST00000402231 743 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 TSSK5P-201ENST00000423978 907 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AL512638.1-201ENST00000457493 794 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AC004890.2-204ENST00000481968 304 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AL590560.3-201ENST00000623350 461 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AC092171.3-201ENST00000610122 2651 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 GRAMD4P3-201ENST00000621665 1669 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AL035456.1-201ENST00000456064 1369 ntBASIC17.76■□□□□ 0.43
NXF3Q9H4D5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NXF3Q9H4D5 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 TSPY16P-201ENST00000449843 468 ntBASIC17.75■□□□□ 0.43
NXF3Q9H4D5 HLA-V-204ENST00000476601 1289 ntBASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 RN7SL204P-201ENST00000582831 262 ntBASIC17.75■□□□□ 0.43
NXF3Q9H4D5 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 RN7SL828P-201ENST00000607615 303 ntBASIC17.75■□□□□ 0.43
NXF3Q9H4D5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NXF3Q9H4D5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms