Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 NKILA-202ENST00000614771 2598 ntBASIC5.61□□□□□ -1.51
KRTAP4-3Q9BYR4 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 KRT8P39-201ENST00000396270 1433 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PMS2P4-201ENST00000412466 1052 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC015922.1-201ENST00000421102 1152 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MTND6P24-201ENST00000440466 518 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PRYP6-201ENST00000514804 343 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC027369.6-201ENST00000525520 931 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AL512356.2-201ENST00000546955 174 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RARRES2P9-201ENST00000565168 469 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AL138828.2-201ENST00000615812 383 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AP001350.2-201ENST00000625104 1094 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AC084121.4-201ENST00000641598 221 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 AF228730.8-201ENST00000642140 221 ntBASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 RELA-227ENST00000615805 2236 ntTSL 5 BASIC5.6□□□□□ -1.51
KRTAP4-3Q9BYR4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms