Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RSPO3Q9BXY4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 FAAHP1-202ENST00000446499 1238 ntBASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AC126177.1-201ENST00000547829 2218 ntBASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AC104640.1-201ENST00000562617 2109 ntBASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.14■□□□□ 0.01
RSPO3Q9BXY4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC004870.1-201ENST00000315132 882 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC093724.1-201ENST00000448659 1027 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC103702.1-201ENST00000548801 2630 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 KRT126P-201ENST00000549467 1181 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AL645728.2-201ENST00000641974 660 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 AC011270.2-201ENST00000624293 2550 ntBASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RSPO3Q9BXY4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms