Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.7□□□□□ -0.06
VRK1Q99986 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC14.7□□□□□ -0.06
VRK1Q99986 AL353135.1-201ENST00000606729 504 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.7□□□□□ -0.06
VRK1Q99986 GGTLC5P-201ENST00000617623 998 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 AL805961.1-202ENST00000641562 540 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 AC006449.5-201ENST00000610658 2098 ntBASIC14.7□□□□□ -0.06
VRK1Q99986 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.7□□□□□ -0.06
VRK1Q99986 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
VRK1Q99986 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
VRK1Q99986 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 AC022188.1-201ENST00000620960 1664 ntBASIC14.69□□□□□ -0.06
VRK1Q99986 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 AP002414.1-201ENST00000391405 1147 ntBASIC14.69□□□□□ -0.06
VRK1Q99986 YBX2P1-201ENST00000394192 760 ntBASIC14.69□□□□□ -0.06
VRK1Q99986 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.69□□□□□ -0.06
VRK1Q99986 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 AL139327.4-201ENST00000612362 153 ntBASIC14.69□□□□□ -0.06
VRK1Q99986 AL691403.2-201ENST00000618460 490 ntBASIC14.69□□□□□ -0.06
VRK1Q99986 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
VRK1Q99986 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
VRK1Q99986 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.69□□□□□ -0.06
VRK1Q99986 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.68□□□□□ -0.06
VRK1Q99986 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 AL135999.2-201ENST00000622438 1686 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.68□□□□□ -0.06
VRK1Q99986 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 NABP1-203ENST00000409510 843 ntTSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 ACTG1P4-201ENST00000425123 1122 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 RPS8P6-201ENST00000426177 609 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.68□□□□□ -0.06
VRK1Q99986 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
VRK1Q99986 KRT18P2-201ENST00000447938 1258 ntBASIC14.68□□□□□ -0.06
VRK1Q99986 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.68□□□□□ -0.06
VRK1Q99986 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms