Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
ARID3AQ99856 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ARID3AQ99856 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
ARID3AQ99856 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.93■□□□□ 0.62
ARID3AQ99856 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.93■□□□□ 0.62
ARID3AQ99856 HLA-J-201ENST00000462773 1622 ntBASIC18.93■□□□□ 0.62
ARID3AQ99856 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.93■□□□□ 0.62
ARID3AQ99856 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
ARID3AQ99856 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
ARID3AQ99856 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ARID3AQ99856 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.93■□□□□ 0.62
ARID3AQ99856 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.93■□□□□ 0.62
ARID3AQ99856 AC099336.1-202ENST00000602961 463 ntBASIC18.93■□□□□ 0.62
ARID3AQ99856 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.93■□□□□ 0.62
ARID3AQ99856 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.93■□□□□ 0.62
ARID3AQ99856 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.93■□□□□ 0.62
ARID3AQ99856 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ARID3AQ99856 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 RNF216P1-203ENST00000404404 2427 ntBASIC18.92■□□□□ 0.62
ARID3AQ99856 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
ARID3AQ99856 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
ARID3AQ99856 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ARID3AQ99856 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
ARID3AQ99856 RCN1P2-201ENST00000398357 915 ntBASIC18.92■□□□□ 0.62
ARID3AQ99856 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.92■□□□□ 0.62
ARID3AQ99856 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.92■□□□□ 0.62
ARID3AQ99856 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.92■□□□□ 0.62
ARID3AQ99856 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.92■□□□□ 0.62
ARID3AQ99856 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
ARID3AQ99856 AC011467.2-201ENST00000598425 242 ntBASIC18.92■□□□□ 0.62
ARID3AQ99856 AC138894.3-201ENST00000603787 634 ntBASIC18.92■□□□□ 0.62
ARID3AQ99856 AC019129.2-201ENST00000609837 1235 ntBASIC18.92■□□□□ 0.62
ARID3AQ99856 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.92■□□□□ 0.62
ARID3AQ99856 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.92■□□□□ 0.62
ARID3AQ99856 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.92■□□□□ 0.62
ARID3AQ99856 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ARID3AQ99856 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ARID3AQ99856 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
ARID3AQ99856 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.91■□□□□ 0.62
ARID3AQ99856 AC005104.2-201ENST00000427818 678 ntBASIC18.91■□□□□ 0.62
ARID3AQ99856 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
ARID3AQ99856 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.91■□□□□ 0.62
ARID3AQ99856 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ARID3AQ99856 AC009533.2-201ENST00000543664 586 ntBASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms