Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AL596325.1-201ENST00000563991 1082 ntBASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 AL662799.1-202ENST00000614205 422 ntBASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK5RAP2Q96SN8 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 LINC01144-201ENST00000626198 1710 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 SERBP1P3-201ENST00000459980 809 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AC055876.2-201ENST00000531834 546 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 TPRX2P-201ENST00000535362 881 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AC009053.2-201ENST00000563701 2365 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 MTHFR-217ENST00000641820 1569 ntBASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK5RAP2Q96SN8 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 CHCHD2P3-201ENST00000603038 451 ntBASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 WBP2-203ENST00000433525 928 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 AC132938.2-201ENST00000579188 680 ntBASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 AL591163.1-201ENST00000641757 987 ntBASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK5RAP2Q96SN8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 Z97205.2-201ENST00000564697 1639 ntBASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CDK5RAP2Q96SN8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms