Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AL671710.1-201ENST00000610245 2349 ntBASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 SNX33P1-201ENST00000592116 1762 ntBASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 COX5BP8-201ENST00000416911 349 ntBASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 RN7SL692P-201ENST00000464677 288 ntBASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC009407.1-201ENST00000568958 598 ntBASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.71■□□□□ 0.59
SYNGAP1Q96PV0 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SYNGAP1Q96PV0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
SYNGAP1Q96PV0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
SYNGAP1Q96PV0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 AC060834.1-201ENST00000443027 2032 ntBASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 RPL37AP1-201ENST00000412502 279 ntBASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 BANF1P1-201ENST00000553684 263 ntBASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 AL589739.1-201ENST00000607720 493 ntBASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.7■□□□□ 0.58
SYNGAP1Q96PV0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.69■□□□□ 0.58
SYNGAP1Q96PV0 AC106820.2-201ENST00000563775 3264 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms