Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RN7SL606P-201ENST00000472779 293 ntBASIC15.24■□□□□ 0.03
HPS1Q92902 AL160237.2-201ENST00000556165 472 ntBASIC15.24■□□□□ 0.03
HPS1Q92902 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.24■□□□□ 0.03
HPS1Q92902 AC124864.1-201ENST00000623408 392 ntBASIC15.24■□□□□ 0.03
HPS1Q92902 AC022726.2-201ENST00000634673 547 ntBASIC15.24■□□□□ 0.03
HPS1Q92902 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HPS1Q92902 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
HPS1Q92902 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.24■□□□□ 0.03
HPS1Q92902 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.23■□□□□ 0.03
HPS1Q92902 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.23■□□□□ 0.03
HPS1Q92902 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.23■□□□□ 0.03
HPS1Q92902 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
HPS1Q92902 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC15.23■□□□□ 0.03
HPS1Q92902 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC15.23■□□□□ 0.03
HPS1Q92902 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.23■□□□□ 0.03
HPS1Q92902 EMBP1-201ENST00000458200 901 ntBASIC15.23■□□□□ 0.03
HPS1Q92902 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.23■□□□□ 0.03
HPS1Q92902 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.23■□□□□ 0.03
HPS1Q92902 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HPS1Q92902 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.23■□□□□ 0.03
HPS1Q92902 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.23■□□□□ 0.03
HPS1Q92902 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.23■□□□□ 0.03
HPS1Q92902 AC139749.1-202ENST00000617529 3139 ntBASIC15.23■□□□□ 0.03
HPS1Q92902 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.23■□□□□ 0.03
HPS1Q92902 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.23■□□□□ 0.03
HPS1Q92902 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HPS1Q92902 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 AL359258.3-201ENST00000622910 2331 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.22■□□□□ 0.03
HPS1Q92902 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
HPS1Q92902 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.22■□□□□ 0.03
HPS1Q92902 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HPS1Q92902 IGHV3-47-201ENST00000425060 335 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 KRT16P4-201ENST00000453883 522 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.22■□□□□ 0.03
HPS1Q92902 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.22■□□□□ 0.03
HPS1Q92902 AL662844.1-201ENST00000546340 181 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.22■□□□□ 0.03
HPS1Q92902 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.22■□□□□ 0.03
HPS1Q92902 BMF-207ENST00000559701 630 ntTSL 3 BASIC15.22■□□□□ 0.03
HPS1Q92902 AC011840.4-201ENST00000578471 627 ntBASIC15.22■□□□□ 0.03
HPS1Q92902 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
HPS1Q92902 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
HPS1Q92902 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms