Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TTC9Q92623 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TTC9Q92623 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9Q92623 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 AC005052.1-201ENST00000625181 2492 ntBASIC15.77■□□□□ 0.12
TTC9Q92623 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC9Q92623 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
TTC9Q92623 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9Q92623 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TTC9Q92623 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9Q92623 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9Q92623 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TTC9Q92623 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.77■□□□□ 0.12
TTC9Q92623 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.77■□□□□ 0.12
TTC9Q92623 GPR53P-205ENST00000457298 1084 ntBASIC15.77■□□□□ 0.12
TTC9Q92623 AC087163.2-201ENST00000457299 853 ntBASIC15.77■□□□□ 0.12
TTC9Q92623 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TTC9Q92623 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.77■□□□□ 0.12
TTC9Q92623 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.77■□□□□ 0.12
TTC9Q92623 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TTC9Q92623 AL161645.1-201ENST00000622716 1255 ntBASIC15.77■□□□□ 0.12
TTC9Q92623 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TTC9Q92623 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.77■□□□□ 0.11
TTC9Q92623 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.77■□□□□ 0.11
TTC9Q92623 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
TTC9Q92623 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9Q92623 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.77■□□□□ 0.11
TTC9Q92623 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9Q92623 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.77■□□□□ 0.11
TTC9Q92623 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9Q92623 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TTC9Q92623 DOC2GP-204ENST00000639052 2548 ntBASIC15.76■□□□□ 0.11
TTC9Q92623 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC9Q92623 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC9Q92623 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.76■□□□□ 0.11
TTC9Q92623 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 PP12613-201ENST00000424958 2230 ntBASIC15.76■□□□□ 0.11
TTC9Q92623 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TTC9Q92623 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TTC9Q92623 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.76■□□□□ 0.11
TTC9Q92623 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TTC9Q92623 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TTC9Q92623 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TTC9Q92623 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 AL136379.1-201ENST00000623471 2642 ntBASIC15.75■□□□□ 0.11
TTC9Q92623 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.75■□□□□ 0.11
TTC9Q92623 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TTC9Q92623 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TTC9Q92623 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.75■□□□□ 0.11
TTC9Q92623 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.75■□□□□ 0.11
TTC9Q92623 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms