Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 OR7E14P-202ENST00000530490 1290 ntBASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.18■□□□□ 0.34
ATG4AQ8WYN0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 AC136632.2-201ENST00000512891 861 ntBASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 CLEC4GP1-201ENST00000596555 870 ntBASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
ATG4AQ8WYN0 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 LINC01144-201ENST00000626198 1710 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 UNC93B7-201ENST00000509439 705 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AC005412.3-201ENST00000580309 715 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 LINC01711-201ENST00000598340 967 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AC010654.1-201ENST00000615722 808 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 TP73-AS1-207ENST00000624167 988 ntBASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
ATG4AQ8WYN0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.15■□□□□ 0.34
ATG4AQ8WYN0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ATG4AQ8WYN0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
ATG4AQ8WYN0 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms