Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AL596087.1-201ENST00000400979 1969 ntBASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 HMGA1P7-201ENST00000406908 502 ntBASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 NMU-203ENST00000507338 658 ntTSL 3 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AL031432.2-201ENST00000566714 459 ntBASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AL928711.1-201ENST00000570165 459 ntBASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
SMARCC2Q8TAQ2 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 AC022188.1-201ENST00000620960 1664 ntBASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 HTR5BP-201ENST00000430851 1154 ntBASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 FAM58CP-201ENST00000435741 640 ntBASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 POU5F1P6-201ENST00000466990 990 ntBASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 AL691403.2-201ENST00000618460 490 ntBASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SMARCC2Q8TAQ2 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SMARCC2Q8TAQ2 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 MTRF1LP2-201ENST00000506027 1122 ntBASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
SMARCC2Q8TAQ2 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms