Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 AC006449.6-201ENST00000612330 2296 ntBASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 AC140658.5-201ENST00000438532 169 ntBASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 AC109635.5-201ENST00000533593 962 ntBASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 AC010327.4-202ENST00000591484 748 ntBASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDH19Q8TAB3 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AC092474.2-201ENST00000424288 719 ntBASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AL513190.1-201ENST00000621254 727 ntBASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AC005622.1-201ENST00000636801 1703 ntBASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 AC092919.2-201ENST00000623631 1645 ntBASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
PCDH19Q8TAB3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 YBX2P1-201ENST00000394192 760 ntBASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
PCDH19Q8TAB3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms