Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLDND2Q8NHS1 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AL139400.1-201ENST00000366220 510 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AL671277.1-201ENST00000429656 993 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AC099522.2-201ENST00000607001 744 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AC026120.1-201ENST00000611536 926 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AC106028.4-201ENST00000614509 607 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AC093028.1-201ENST00000622998 982 ntBASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLDND2Q8NHS1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 AC016396.2-201ENST00000562575 1417 ntBASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 FAM86C2P-203ENST00000528684 1004 ntBASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 AC004449.1-201ENST00000564240 433 ntBASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.09□□□□□ -0.15
CLDND2Q8NHS1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms