Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL9Q8NET4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.21■□□□□ 0.83
RTL9Q8NET4 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
RTL9Q8NET4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 AC005915.1-201ENST00000624912 2018 ntBASIC20.2■□□□□ 0.82
RTL9Q8NET4 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 LINC01144-201ENST00000626198 1710 ntBASIC20.2■□□□□ 0.82
RTL9Q8NET4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL9Q8NET4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RTL9Q8NET4 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 U91328.1-201ENST00000437528 223 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 RN7SL618P-201ENST00000477850 296 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 AC004790.1-201ENST00000612686 536 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL9Q8NET4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RTL9Q8NET4 AC078925.2-201ENST00000624013 1973 ntBASIC20.19■□□□□ 0.82
RTL9Q8NET4 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 HLA-A-202ENST00000376806 1854 ntBASIC20.18■□□□□ 0.82
RTL9Q8NET4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTL9Q8NET4 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.18■□□□□ 0.82
RTL9Q8NET4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms