Protein–RNA interactions for Protein: Q8NEG7

DENND6B, Protein DENND6B, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND6BQ8NEG7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND6BQ8NEG7 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND6BQ8NEG7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
DENND6BQ8NEG7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.41■□□□□ 0.22
DENND6BQ8NEG7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AC055876.3-201ENST00000431496 288 ntBASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 RARRES2P9-201ENST00000565168 469 ntBASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AL390955.2-201ENST00000603032 514 ntBASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AC138649.4-201ENST00000612222 287 ntBASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AC073439.1-201ENST00000624121 1774 ntBASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
DENND6BQ8NEG7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
DENND6BQ8NEG7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 MIR943-201ENST00000401286 94 ntBASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 AC020765.3-201ENST00000613051 740 ntBASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
DENND6BQ8NEG7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 FAM220BP-201ENST00000377689 816 ntBASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 BASP1P1-201ENST00000430708 665 ntBASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.38■□□□□ 0.21
DENND6BQ8NEG7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms