Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AC005412.3-201ENST00000580309 715 ntBASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AL671883.3-201ENST00000603274 991 ntBASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SIMC1Q8NDZ2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AC006538.1-201ENST00000567905 1585 ntBASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 HMGA1P7-201ENST00000406908 502 ntBASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 RHOQP3-201ENST00000437982 621 ntBASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SIMC1Q8NDZ2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AC099063.4-201ENST00000641099 1602 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 MIR940-201ENST00000401276 94 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AC096734.2-201ENST00000562054 433 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AL513190.1-201ENST00000621254 727 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AC092865.6-201ENST00000642101 219 ntBASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SIMC1Q8NDZ2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms