Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 ELK1P1-201ENST00000485699 580 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 TPRX2P-201ENST00000535362 881 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AC023310.3-201ENST00000557027 670 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AC100756.1-201ENST00000562736 682 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AC138749.3-201ENST00000567691 622 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AC116165.1-201ENST00000611806 668 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AL589702.1-201ENST00000641229 1509 ntBASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CARMIL3Q8ND23 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 SDHAP3-202ENST00000515467 728 ntBASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AC004461.2-201ENST00000629517 803 ntBASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AL139011.1-202ENST00000642063 584 ntBASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CARMIL3Q8ND23 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
CARMIL3Q8ND23 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 MEP1AP4-201ENST00000423244 1087 ntBASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 AL512343.1-201ENST00000605837 169 ntBASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC20.51■□□□□ 0.87
CARMIL3Q8ND23 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 AC092658.1-201ENST00000505836 891 ntBASIC20.5■□□□□ 0.87
CARMIL3Q8ND23 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms